Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816936.1_cds_XP_016499028.1_12994
CDS Infomation

[gene=LOC107817678] [db_xref=GeneID:107817678] [protein=TPR repeat-containing thioredoxin TTL1-like] [partial=3'] [protein_id=XP_016499028.1] [location=complement(join(<9..132,216..397,488..683,1603..2531))] [gbkey=CDS]
Sequence

ATGTCGCATTCTGGAAAGCCCATATCGGAAATGGGTTTTGACTCGTTAGCTGATCGGTTG
AGAAACTCATTACTGAGTAGTTGTAATATTAACGAAGAGGAGGAGAAGAACGATAACAAG
CCCGATTTTCGAGAACTGGATCTGGGTTCACCCGTTTCACCATTAATAACCCGAACGAGT
CGACTCAGTACCTCCACCACCACCACCACTACTACTACTACTACAAGTAGCAGATCTAGC
TCATCATCTGGATCCGGGTCGGGTCGAAATGTGTCATATTCGGGTCCTAAAAGGTCTGAT
TCGAGCCATTCCGGCGAACTTTCGGGTTCGGGTTCAGCCGAGAGCTCGCCTACAGTACGT
GGGCTCAAACCGGGTCATGGGCGGTCCGATTCGGGAAATACACATCCGTTAATTTACTCC
GGCGGATGCTCCGTCACTTCCCCTGTCGGTAATGCGCTTCCGGCTGGCAATATTTGCCCG
TCCGGCAAGATTTTGAAAACCGGCATGGCTTGTAAATCCACAAAGACTGATGTTTTAGGG
ACCGGAACGGCTAATTACGGCCATGGCAGCATAATGCGCGGCGGTGCGGGTCCAAAATCC
GCCGTCGATGGCGGTTCTGGCCATACTATGAATTCAAGAGGATTTACTGTTGGTGAGACA
GTAAAAAGAGGGAGTTTTACTAATGATTCAGATGAGTTGAAAAGAATAGGGAATGAGAAT
TACAAGAAGGGTAATTTTATTGAAGCTTTGAATATTTATGATAAAGCCATTGCTATTTCT
CCGGGCAATGCTGCATTACATTGTAATCGAGCTGCTGCCTTAATGGCTTTGAACCGGCTA
GGGGAGGCAGTGAAGGAATGTGAGGAAGCCATTAGGCTGGATCCATCGTATGTTAGAGCA
CACCAACGATTAGGATCTTTGTTACTTAGTTTAGGACAGGTTGAAAATGCAAGGAGTCAC
TTTTTTTCCCTAGGTCATAAGCCAGATCAAGCGGAGTTGCAGAAGTTGCAAGCGGTGGAG
AAACATATCAGCAAATGCACTGATGCCCGGAGAGTTAGAGATTGGAAAAGTACATTAAGA
GAAGCTGAGGCAGCAACCGCTTCTGGAGCTGATGCATCTCCTCAGCTATTTGCATGTAGA
GCGGAAGCTTATTTGAAGTTACACAAATTGGAGGATGCTGAATTGTGCCTATCAAAAATT
AACAAGTTCGAACCATCTGTTGTAGCTTGCCAATCAAAATTTTTTGGGATGCTCTCTGAA
GCATACGTATTCTTTGTTCAGGCTCAGATTGAGATGGCTCGGGGAAGGTTTGAAAATGCA
CTTACTTCCATTGAGAGAGCTGCACAAGTTGACCCTCGAAGTATTGATGTTTCTGTTTTA
CTCAACAATGTGAGGCTGGTGGGGCAAGCTCGTGGTCGCGGCAACAATCTA

Peptide Sequence

PEP ID

XP_016499028.1
PEP Infomation

PREDICTED: TPR repeat-containing thioredoxin TTL1-like, partial [Nicotiana tabacum]
Sequence

MSHSGKPISEMGFDSLADRLRNSLLSSCNINEEEEKNDNKPDFRELDLGSPVSPLITRTS
RLSTSTTTTTTTTTTSSRSSSSSGSGSGRNVSYSGPKRSDSSHSGELSGSGSAESSPTVR
GLKPGHGRSDSGNTHPLIYSGGCSVTSPVGNALPAGNICPSGKILKTGMACKSTKTDVLG
TGTANYGHGSIMRGGAGPKSAVDGGSGHTMNSRGFTVGETVKRGSFTNDSDELKRIGNEN
YKKGNFIEALNIYDKAIAISPGNAALHCNRAAALMALNRLGEAVKECEEAIRLDPSYVRA
HQRLGSLLLSLGQVENARSHFFSLGHKPDQAELQKLQAVEKHISKCTDARRVRDWKSTLR
EAEAATASGADASPQLFACRAEAYLKLHKLEDAELCLSKINKFEPSVVACQSKFFGMLSE
AYVFFVQAQIEMARGRFENALTSIERAAQVDPRSIDVSVLLNNVRLVGQARGRGNNL

Transcript Sequence

Gene sequence data has not been registered.